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Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

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Nội dung chi tiết: Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

VIETNAM NATIONAL UNIVERSITY, HANOI UNIVERSITY OF ENGINEERING AND TECHNOLOGY-------NGUYEN HOANG SONDETECTING BAD SNPS FROM ILLUMINA BEADCHIPS USING JEF

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreysFFREYS DISTANCEMASTER THESIS OF INFORMATIONTECHNOLOGYHanoi - 2012ORIGINALITY STATEMENT‘I hereby declare that this submission is my own work and to the

best of my knowledge it contains no materials previously published or written by another person, or substantial proportions of material which have be Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

en accepted for the award of any other degree or diploma al UET or any ot her educational institution, except where due acknowledgement is made in the

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

thesis. Any contribution made to the research by others is explicitly acknowledged in the thesis. I also declare that the intellectual content of thi

VIETNAM NATIONAL UNIVERSITY, HANOI UNIVERSITY OF ENGINEERING AND TECHNOLOGY-------NGUYEN HOANG SONDETECTING BAD SNPS FROM ILLUMINA BEADCHIPS USING JEF

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreysation and linguistic expression is acknowledged.'Signed...........................................AbstractCiưrent microarray technologies are able to

assay thousands of samples over million of SNPs simultaneously. Computational approaches have been developed to analyse a huge amount of data from mic Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

roarray chips to understand sophisticated human genomes. The data from microarray chips might contain errors due to bad samples or bad SNPs. In this t

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

hesis, a novel method is proposed to detect bad SNPs from the probe intensities data of Illumina Beadchips. This approach measures the difference amon

VIETNAM NATIONAL UNIVERSITY, HANOI UNIVERSITY OF ENGINEERING AND TECHNOLOGY-------NGUYEN HOANG SONDETECTING BAD SNPS FROM ILLUMINA BEADCHIPS USING JEF

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys people demonstrates the usefulness of our method. This approach reduces the number of SNPs that are needed to check manually. Furthermore, it has the

ability in detecting bad SNPs that have not been recognized by other criteria.AcknowledgementsApart from the efforts of myself, the success of any pr Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

oject depends largely on the encouragement and guidelines of many others. First and foremost, I would like to thank to my supervisor Dr. Sy Vinh Le fo

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

r the valuable guidance and advice. This research project would not have been finished successfully without his continuously support and assistance. H

VIETNAM NATIONAL UNIVERSITY, HANOI UNIVERSITY OF ENGINEERING AND TECHNOLOGY-------NGUYEN HOANG SONDETECTING BAD SNPS FROM ILLUMINA BEADCHIPS USING JEF

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys encouragement and insightful comments of Dr. Si Quang Le during tile time of research of this thesis. His brilliant ideas helped me so much to overco

me numerous problems and difficulties. Any word is inadequate for his helpful aids.The author would also like to convey thanks to the Department of Co Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

mputer Science for providing the useful preferences and laboratory facilities. I also wish to express love and gratitude to my beloved families; for t

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

heir understanding and endless love, through the duration of my studies.My thanks and appreciations also go to my colleague in developing the project

VIETNAM NATIONAL UNIVERSITY, HANOI UNIVERSITY OF ENGINEERING AND TECHNOLOGY-------NGUYEN HOANG SONDETECTING BAD SNPS FROM ILLUMINA BEADCHIPS USING JEF

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys.................. 31.2SNP Genotyping.............................................. 51.3Quality Control andQuality Assurance....................... 72

Related Work102.1Naive method for SNP genotyping............................ 102.2GenCall.................................................. 112.3lll Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

uminus.................................................. 122.1GenoSNP.................................................... 122.5Discussion.............

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys

.................................... 133Method153.1Kullback-Leibler divergence................................ 153.2Approximate relative entropy betwe

VIETNAM NATIONAL UNIVERSITY, HANOI UNIVERSITY OF ENGINEERING AND TECHNOLOGY-------NGUYEN HOANG SONDETECTING BAD SNPS FROM ILLUMINA BEADCHIPS USING JEF

Luận văn thạc sĩ detecting bad snps from illumina beadchips using jeffreys distance, phát hiện các snp xấu từ illumina beadchips sử dụng khoảng cách jeffreys.... 17

VIETNAM NATIONAL UNIVERSITY, HANOI UNIVERSITY OF ENGINEERING AND TECHNOLOGY-------NGUYEN HOANG SONDETECTING BAD SNPS FROM ILLUMINA BEADCHIPS USING JEF

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